Read an SBML model

Reads an SBML file and keeps the parsed document alive for the other query functions. A file with error- or fatal-severity diagnostics is an error; lesser diagnostics are raised as warnings.

Usage

getModel(filename)

Arguments

filename

input file name, should end with .xml

Value

an external pointer to the model, to pass to the other functions

Examples

sbml_file <- system.file("examples", "sbmlsimple.xml", package = "r2sbml")
model <- getModel(sbml_file)
#> 
#>   filename: /home/runner/work/_temp/Library/r2sbml/examples/sbmlsimple.xml
#>   error(s): 0
#> 
#> 
#> File: /home/runner/work/_temp/Library/r2sbml/examples/sbmlsimple.xml (Level 3, version 2)