Summarise an SBML file — printSBML • r2sbml

Prints the file's SBML level and version and how many of each component its model has.

Usage

printSBML(filename)

Arguments

filename: filename should be the name of the xml file

Value

0 on success and 1 when the file has errors or no model; called for the printed summary

Examples

sbml_file <- system.file("examples", "sbmlsimple.xml", package = "r2sbml")
printSBML(sbml_file)
#> 
#>   filename: /home/runner/work/_temp/Library/r2sbml/examples/sbmlsimple.xml
#>   error(s): 0
#> 
#> 
#> File: /home/runner/work/_temp/Library/r2sbml/examples/sbmlsimple.xml (Level 3, version 2)
#>                  id: (empty)
#> functionDefinitions: 0
#>     unitDefinitions: 2
#>    compartmentTypes: 0
#>         specieTypes: 0
#>        compartments: 1
#>             species: 4
#>          parameters: 0
#>  initialAssignments: 0
#>               rules: 0
#>         constraints: 0
#>           reactions: 2
#>              events: 0
#> 
#> [1] 0